Distribution and ecology of stream fishes in the San Francisco Bay drainage
AuthorR. A. Leidy
Author AffiliationsR. A. Leidy was a graduate student and research assistant, Department of Forestry and Resource Management, University of California, Berkeley, and is now a fisheries consultant with Environmental Impact Planning Corporation, San Francisco, California.
Hilgardia 52(8):1-177. DOI:10.3733/hilg.v52n08p175. October 1984.
The distribution and ecology of fishes in 457 sampling sites on 175 streams of the San Francisco Bay drainage, California, was determined between 11 May and 10 October 1981. Of 35 species collected, 22 (63 percent) were exotic to California and 13 (37 percent) were native. Urbanization has resulted in the alternation and destruction of many stream habitats within the basin, and in changes in the dominance of fish assemblages from native to introduced species. Four native species, Rhinichthys osculus, Eucyclogobius newberryi, Pogonichthys macrolepidotus, and Gila crassicauda, are apparently extinct in study area streams in which they historically occurred. Several other species, Oncorhynchus kisutch, Mylopharodon conocephalus, Hysterocarpus traskii, and Archoplites interruptus, have experienced significant reductions in their ranges. The abundance of native fishes was positively correlated with the occurrence of other native species primarily in stream habitats with little noticeable human disturbance. The abundance of introduced fishes shows a significant negative correlation with the occurrence of native species. Introduced fishes occurred primarily in large, highly disturbed pools at low and intermediate elevations, often in channelized stream sections. Local extinctions of isolated populations of native fishes throughout the basin will continue to occur should aquatic habitat alteration continue at its present rate.
Aceituno M. E., Caywood M. L., Nicola S. J. A survey of the fishes of the Central Valley, California 1973. Unpublished manuscript, Calif. Fish, Game
Aceituno M. E., Caywood M. L., Nicola S. J., Follett W. I. Occurrence of native fishes in Alameda and Coyote Creeks, California. Calif. Fish, Game. 1976. 62(3):195-206.
American Fisheries Society. A list of common and scientific names of fishes from the United States and Canada 1980. 4th ed. Amer. Fish. Soc. Spec. Publ. No. 7
Arnold K. Comparison of spawning activity of rainbow trout in San Leandro and Redwood Creeks 1973. Unpublished manuscript, University of California, Berkeley
Avise J. C., Smith J. J., Ayola F. J. Adaptive differentiation with little genic change between two native California minnows. Evolution. 1975. 29:411-26. DOI: 10.2307/2407254 [CrossRef]
Ayres W. O. Description of Salmo rivularis and Petromyzon ciliatus. Proc. Calif. Acad. Nat. Sci. 1855. 1(1):43-45.
Brittan M., Albrecht A., Hopkirk J. An oriental goby collected in the San Joaquin River delta near Stockton, California. Calif. Fish, Game. 1963. 49(4):302-04.
Brittan M., Hopkirk J., Conners J., Martin M. Explosive spread of the oriental goby, Acanthogobius flavimanus in the San Francisco Bay-Delta regions of California. Proc. Calif. Acad. Sci. 1970. 38(11):207-14.
California Department of Water Resources. Reconnaissance study of the natural resources of the Arroyo Del Valle Basin, Alameda and Santa Clara counties 1974. p.53. Central District
Caywood M. L. Contributions to the life history of the splittail Pogonichthys macrolepidotus 1974. p.91. Unpublished M.S. thesis, Sacramento State University
Chiang C., Selvin S. Text for Bioenvironmental Engineering 160ABC 1980. Unpublished mimeo, University of California, Berkeley
Cooper J. J. Distributional ecology of native and introduced fishes in the Pit River System, northeastern California, with notes on the Modoc sucker. Calif. Fish, Game. 1983. 69(1):39-53.
Dill W. A. Creel census at Stevens Creek. 1938. Game: Calif. Div. Fish. 17p.
Eigenmann C. H. The food fishes of California fresh waters. Biennial Rpt. Calif. Fish. Comm. 1890. 1888-1890:53-65.
Evermann B. W., Latimer H. B. On a collection of fishes from the Olympic Peninsula, together with notes on other West Coast species. Proc. Biol. Soc. Wash. 1910. 23:131-40.
Evermann B. W., Clark H. W. A distributional list of the species of freshwater fishes known to occur in California. Calif. Fish, Game Bull. 1931. 35:67
Fry D. H. Life history of Hesperoleucas venustus Snyder. Calif. Fish, Game. 1936. 22(2):65-98.
Fry D. H. Anadromous fishes of California. 1973. Game: Calif. Dept. Fish. 112p.
Gibbons W. P. Description of a new trout. Proc. Acad. Nat. Sci. 1855. 1(1):35-36.
Girard C. Descriptions of new fishes, collected by Dr. A. L. Meerman, naturalist attached to the survey of the Pacific railroad route under Lieut. R. S. Williamson, USA. Proc. Acad. Nat. Sci. Phila. 1854. 7:129-40.
Girard C. A list of fishes collected by Mr. E. Samuels with descriptions of the new species. Boston J. Nat. Hist. 1857a. 6:533-44. Art. 28
Girard C. Report upon fishes collected on the survey. In Reports of explorations and surveys to ascertain the most practicable and economical route for a railroad from the Mississippi River to the Pacific Ocean. 1857b. 6(4):9-34. U.S. House Rep. Ex. Doc. No. 91, 33rd Congr., 2nd Session, Washington, D.C
Girard C. Reports of explorations and surveys to ascertain the most practicable and economical route for a railroad from the Mississippi River to the Pacific Ocean 1859. p.400. 33rd Congress, 2nd Session, Ex. Doc. No. 78, Fishes: Vol. X, Pt. 4
Guzzetta D. J. A preliminary survey of the aquatic habitat of Henry W 1974. Coe State Park with management proposals. M.A. thesis, San Jose State University, California
Hallock R. J., Fry D. H. Jr. Five species of salmon, Oncorhynchus, in the Sacramento River, California. Calif. Fish, Game. 1967. 53(1):5-22.
Hopkirk J. D. Endemism in fishes of the Clear Lake Region. Univ. Calif. Publ. Zool. 1973. 96:160
Hubbs C. L. The life-cycle and growth of lampreys 1924. Papers Mich. Acad. Sci., Arts, Letters (1):587-603
Hubbs C. L., Miller R. R. Study of cyprinodont fishes 1965. p.104. XXII. Variation in Lucania parva, its establishment in western United States, and description of a new species from an interior basin in Coahuila, Mexico. Univ. Mich. Zool. Misc. Publ. 127 DOI: 10.2307/1435645 [CrossRef]
Hubbs C. L., Follett W. I., Demptser L. J. List of fishes of California. Occ. Papers Calif. Acad. Sci. 1979. 133:51
Jordan D. S. The trout and salmon of the Pacific coast 1907. pp.77-92. Rpt. State Board Fish Comm. Calif., 1905-1906
Jordan D. S., Gilbert C. H. Notes on the fishes of the Pacific coast of the United States. Proc. U.S. Nat. Mus., 1881. 1881. 4:29-70. DOI: 10.5479/si.00963801.4-191.29 [CrossRef]
Jordan D. S., Jouy P. L. Check-list of duplicates of fishes from the Pacific coast of North America, distributed by the Smithsonian Institution in behalf of the United States National Museum. 1881. 1881:1-18. Proc. U.S. Nat. Mus., 1881 4: DOI: 10.5479/si.00963801.185 [CrossRef]
Leidy R. A. Distribution of fishes in streams of the Walnut Creek basin, California. Calif. Fish, Game. 1983. 69(1):23-32.
Lockington W. N. Report upon the food fishes of San Francisco. Rpt. Calif. Fish. Comm. 1879. 1878-1879:17-58.
Miller R. R. Synonymy, characters, and variation of Gila crassicauda, a rare California minnow, with an account of its hybridization with Lavinia exilcauda. Calif. Fish, Game. 1963. 49(1):20-29.
Mills T. J., Mamika K. A. The thicktail chub, Gila crassicauda, an extinct California fish 1980. p.21. Calif. Fish, Game Inland Fisheries Endangered Species Program, Sec. Publ. 80-82
Moyle P. B. Inland fishes of California. 1976a. Berkeley: University of California Press. 405p. DOI: 10.1016/j.biocon.2011.06.002 [CrossRef]
Moyle P. B. Fish introductions in California: history and impact on native fishes. Biol. Conserv. 1976b. 9:101-18. DOI: 10.1016/0006-3207(76)90043-4 [CrossRef]
Moyle P. B., Nichols R. Ecology of some native and introduced fishes of the Sierra Nevada foothills in central California. Copeia. 1973. 3:478-90. DOI: 10.2307/1443113 [CrossRef]
Moyle P. B. Decline of the native fish fauna of the Sierra Nevada foothills, central California. Amer. Midl. Nat. 1974. 92(1):72-83. DOI: 10.2307/2424203 [CrossRef]
Moyle P. B., Smith J. J., Daniels R. A., Taylor T. L., Price D. G., Baltz D. M. Distribution and ecology of stream fishes of the Sacramento-San Joaquin drainage system, California. University of California Publ. Zool. 1982. 15: Berkeley: University of California Press. 256p.
Murphy G. Distribution and variation of the roach (Hesperoleucus) in the coastal region of California 1943. p.55. M.S. thesis, University of California, Berkeley
Needham P. R., Gard R. Rainbow trout in Mexico and California, with notes on the cutthroat series. University of California Publ. Zool. 1959. 67(1):55
Rutter C. The fishes of the Sacramento-San Joaquin basin, with a study of their distribution and variation. Bull. U.S. Bur. Fish. 1908. 27(637):103-52.
Scoppettone G. C., Smith J. J. Additional records on the distribution and status of native fishes in Alameda and Coyote creeks, California. Calif. Fish, Game. 1978. 64(1):62-65.
Shapovalov L. Report on four reservoirs in Napa and Solano counties. 1940. Game: Calif. Div. Fish. 17p.
Shapovalov L. Creel census at Stevens Creek and Stevens Creek Reservior, Santa Clara County. 1942. Game: Calif. Div. Fish. 16p.
Shapovalov L. Creel census at Stevens Creek and Stevens Creek Reservior, Santa Clara County. 1943. Game: Calif. Div. Fish. 14p.
Shapovalov L. Creel census at Stevens Creek and Stevens Creek Reservior, Santa Clara County. 1944. Game: Calif. Div. Fish. 23p.
Shapovalov L. Creel census at Stevens Creek and Stevens Creek Reservior, Santa Clara County. 1945. Game: Calif. Div. Fish. 24p.
Shapovalov L. Creel census at Stevens Creek and Stevens Creek Reservior, Santa Clara County. 1946. Game: Calif. Div. Fish. 41p.
Shapovalov L., Dill W. A., Cordone A. J. A revised checklist of the freshwater and anadromous fishes of California. Calif. Dept. Fish, Game. 1959. 45(3):155-80.
Shebley W. H. History of the introduction of food and game fishes into the waters of California. Calif. Fish, Game. 1917. 3(1):3-12.
Skinner J. E. An historical view of the fish and wildlife resources of the San Francisco Bay area. Calif. Dept. Fish, Game Water Projects Branch Rpt. 1962. 1:225
Snyder J. O. Notes on the fishes of the streams flowing into the San Francisco Bay. Rept. Bur. Fish App. 1905. 5:327-38.
Snyder J. O. The fishes of the coastal streams of Oregon and northern California. Bull. U.S. Fish. 1908. 27:153-89.
Snyder J. O. The fishes of the streams tributary to Monterey Bay, California. Bull. U.S. Fish. 32. 1913. 1912:49-72.
Sokal R. R., Rohlf F. J. Biometry: The principles and practice of statistics in biological research. 1981. San Francisco: W. H. Freeman. 859p.
Taft A. C. Age and growth of Ptychocheilus grandis, a western minnow 1928. M. A. thesis, Stanford University
Taft A. C., Murphy G. I. The life history of the Sacramento squawfish (Ptychocheilus grandis). Calif. Fish, Game. 1950. 36(2):147-64.
Turner J. L., Kelley D. W. Ecological studies of the Sacramento-San Joaquin Delta, Part III. Calif. Dept. Fish, Game Bull. 1966. 136:168